Описание
The IPSP-FTC dataset includes plant pathogenic fungi causing diseases on forest and urban trees. Fungi were isolated from plant material of various origin, and were characterized by their pathogenicity on plant species. The accessions are maintained in vitro on artificial substrates, in refrigerators at -4°C in glass tubes or at -20 °C in glycerol, or as spores and conidia on vegetal material. Strains are available for research purposes.
Записи данных
Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 491 записей.
Также в наличии 3 таблиц с данными расширений. Записи расширений содержат дополнительную информацию об основной записи. Число записей в каждой таблице данных расширения показано ниже.
Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.
Версии
В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.
Как оформить ссылку
Исследователи должны дать ссылку на эту работу следующим образом:
Danti R, Della Rocca G, Secci S, Barberini S, Frascella A, Emiliani G (2023). Forest Tree Fungal Collection (CNR-IPSP-FTFC). Version 1.0. GBIF Secretariat. Occurrence dataset. https://www.gbif.org/dataset/
Права
Исследователи должны соблюдать следующие права:
Публикующей организацией и владельцем прав на данную работу является Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Эта работа находится под лицензией Creative Commons Attribution Non Commercial (CC-BY-NC 4.0).
Регистрация в GBIF
Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: 884829eb-8f00-4f85-8365-783759ea0f2c. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке DiSSCo.
Ключевые слова
Occurrence; Fungi; Mycelium; Pathogens; Cankers; Tree diseases; Specimen
Внешние данные
Ресурс также доступен в других форматах
| API JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=138 UTF-8 Darwin Core |
|---|
Контакты
- Point Of Contact
- Curator and scientific responsible of the collection
- Via Madonna del Piano 10
https://orcid.org/0000-0002-2866-3688
- Originator
- Curator of the collection
- Via Madonna del Piano 10
- Originator
- Responsible for cultivation and preservation of plants and web database update
- Via Madonna del Piano 10
- Originator
- Responsible for molecular characterization and micropropagation
- Via Madonna del Piano 10
- Originator
- Molecular characterization and strain preservation
- Via Madonna del Piano 10
- Originator
- Molecular characterization and database responsible of collection
- Via Madonna del Piano 10
- Metadata Provider
- Senior Researcher
- v. Madonna del Piano 10
- Metadata Provider
- Senior Technologist
- v. F. De Blasio 5
- Point Of Contact
- Reference Person
- Via Madonna del Piano 10
- Content Provider
- Research Department
- p.le Aldo Moro 7
Географический охват
Italy, Greece, United States of America, France, Algeria, Spain, Malta, Morocco, Portugal, Canada, Libya
| Ограничивающие координаты | Юг Запад [-19, -180], Север Восток [90, 180] |
|---|
Таксономический охват
Large variety of ascomycetous fungi, some basidiomycetes, characterized as pathogens of forest trees (Seiridium spp., Diplodia spp., Pestalotiopsis spp., Armillaria spp., Heterobasidion abietinum, Cryphonectria parasitica). A second core of collection is composed by 35 strains of Trichoderma spp. and Clonostachys rosea, characterized as Biocontrol Agents (BCA). Some basidiomycetes used for trials on mycelium-based biomaterial (Pleurotus ostreatus, Phomitopsis pinicola, Ganoderma lucidum, Trametes versicolor). One strain of the oomycetes Phytophthora cambivora and one of P. cinnamomi are also available.
| Kingdom | Fungi |
|---|---|
| Family | Pestalotiopsidaceae, Botryosphaeriaceae, Gnomoniaceae, Amphisphaeriaceae, Didymellaceae, Godroniaceae |
Временной охват
| Период формирования | 1999-2014 |
|---|
Данные проекта
ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity is aimed to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) which have been created and maintained through past and current research projects. The full digitization of the research collections currently offline will be achieved along with the reorganization, standardization and harmonization of the data and metadata currently available in the main online collections. All the taxonomic, genetic, geographical, ecological, physiological information for each specimen will be organized in an easily searchable platform supported by web-GIS functionalities. Reference to genetic/genomic data for each specimen will allow for the identification of the most interesting material for further genetic/genomic analysis. The availability of such huge amount of information on plant, animal, and microbial genetic resources will pave the way for the dissection of the morpho-physiological and molecular mechanisms of adaptation to climate change. BioMemory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project is aimed to create a network of biobanks (i.e., scientific research collections) where data and metadata associated to biological samples of different nature are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for a number of purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals and plants.
| Название | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
|---|---|
| Идентификатор | PNRR Project IR0000032 | CNR SAC.AD002.173 |
| Финансирование | ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BioMemory (CNR-DiSBA Project No. SAC.AD002.173 |
Исполнители проекта:
Данные коллекции
| Название коллекции | IPSP Forest Tree Fungal Collection (CNR-IPSP-FTFC) |
|---|---|
| Идентификатор коллекции | 6635259a-e0c9-436e-af0f-7a4a62217bf9 |
| Методы сохранения образцов | Deep frozen, Refrigerated, Glycerin, Other |
|---|
Дополнительные метаданные
Data and samples collected and analyzed within the following research projects: Partner of MIRRI Italian Node (http://www.mirri-it.it); involved in CNR BioGenRes (http://www.biogenres.cnr.it/); Life Mycorestore (LIFE18 CCA/IT/001110)
| Цель | Plant Pathology, Biocontrol agents, Forestry |
|---|---|
| Описание частоты обновления ресурса | Cryo: Freezer at -20°C, in cryovials with spore suspension or with mycelium plug in water glycerol (50% v/V) or in pure water. Fresh cultures: Refrigerator at 4°C in agar slants with mycelium. |
| Альтернативные идентификаторы | https://ipt.ibbr.cnr.it/ipt/resource?r=ipsp-ftfc |