Descripción
The IPSP-FTC dataset includes plant pathogenic fungi causing diseases on forest and urban trees. Fungi were isolated from plant material of various origin, and were characterized by their pathogenicity on plant species. The accessions are maintained in vitro on artificial substrates, in refrigerators at -4°C in glass tubes or at -20 °C in glycerol, or as spores and conidia on vegetal material. Strains are available for research purposes.
Registros
Los datos en este recurso de registros biológicos han sido publicados como Archivo Darwin Core(DwC-A), el cual es un formato estándar para compartir datos de biodiversidad como un conjunto de una o más tablas de datos. La tabla de datos del core contiene 491 registros.
también existen 3 tablas de datos de extensiones. Un registro en una extensión provee información adicional sobre un registro en el core. El número de registros en cada tabla de datos de la extensión se ilustra a continuación.
Este IPT archiva los datos y, por lo tanto, sirve como repositorio de datos. Los datos y los metadatos del recurso están disponibles para su descarga en la sección descargas. La tabla versiones enumera otras versiones del recurso que se han puesto a disposición del público y permite seguir los cambios realizados en el recurso a lo largo del tiempo.
Versiones
La siguiente tabla muestra sólo las versiones publicadas del recurso que son de acceso público.
¿Cómo referenciar?
Los usuarios deben citar este trabajo de la siguiente manera:
Danti R, Della Rocca G, Secci S, Barberini S, Frascella A, Emiliani G (2023). Forest Tree Fungal Collection (CNR-IPSP-FTFC). Version 1.0. GBIF Secretariat. Occurrence dataset. https://www.gbif.org/dataset/
Derechos
Los usuarios deben respetar los siguientes derechos de uso:
El publicador y propietario de los derechos de este trabajo es Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Esta obra está bajo una licencia Creative Commons de Atribución/Reconocimiento-NoComercial (CC-BY-NC 4.0).
Registro GBIF
Este recurso ha sido registrado en GBIF con el siguiente UUID: 884829eb-8f00-4f85-8365-783759ea0f2c. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) publica este recurso y está registrado en GBIF como un publicador de datos avalado por DiSSCo.
Palabras clave
Occurrence; Fungi; Mycelium; Pathogens; Cankers; Tree diseases; Specimen
Datos externos
Los datos del recurso también están disponibles en otros formatos
| API JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=138 UTF-8 Darwin Core |
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Contactos
- Punto De Contacto
- Curator and scientific responsible of the collection
- Via Madonna del Piano 10
https://orcid.org/0000-0002-2866-3688
- Originador
- Curator of the collection
- Via Madonna del Piano 10
- Originador
- Responsible for cultivation and preservation of plants and web database update
- Via Madonna del Piano 10
- Originador
- Responsible for molecular characterization and micropropagation
- Via Madonna del Piano 10
- Originador
- Molecular characterization and strain preservation
- Via Madonna del Piano 10
- Originador
- Molecular characterization and database responsible of collection
- Via Madonna del Piano 10
- Proveedor De Los Metadatos
- Senior Researcher
- v. Madonna del Piano 10
- Proveedor De Los Metadatos
- Senior Technologist
- v. F. De Blasio 5
- Punto De Contacto
- Reference Person
- Via Madonna del Piano 10
- Proveedor De Contenido
- Research Department
- p.le Aldo Moro 7
Cobertura geográfica
Italy, Greece, United States of America, France, Algeria, Spain, Malta, Morocco, Portugal, Canada, Libya
| Coordenadas límite | Latitud Mínima Longitud Mínima [-19, -180], Latitud Máxima Longitud Máxima [90, 180] |
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Cobertura taxonómica
Large variety of ascomycetous fungi, some basidiomycetes, characterized as pathogens of forest trees (Seiridium spp., Diplodia spp., Pestalotiopsis spp., Armillaria spp., Heterobasidion abietinum, Cryphonectria parasitica). A second core of collection is composed by 35 strains of Trichoderma spp. and Clonostachys rosea, characterized as Biocontrol Agents (BCA). Some basidiomycetes used for trials on mycelium-based biomaterial (Pleurotus ostreatus, Phomitopsis pinicola, Ganoderma lucidum, Trametes versicolor). One strain of the oomycetes Phytophthora cambivora and one of P. cinnamomi are also available.
| Reino | Fungi |
|---|---|
| Familia | Pestalotiopsidaceae, Botryosphaeriaceae, Gnomoniaceae, Amphisphaeriaceae, Didymellaceae, Godroniaceae |
Cobertura temporal
| Periodo de formación | 1999-2014 |
|---|
Datos del proyecto
ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity is aimed to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) which have been created and maintained through past and current research projects. The full digitization of the research collections currently offline will be achieved along with the reorganization, standardization and harmonization of the data and metadata currently available in the main online collections. All the taxonomic, genetic, geographical, ecological, physiological information for each specimen will be organized in an easily searchable platform supported by web-GIS functionalities. Reference to genetic/genomic data for each specimen will allow for the identification of the most interesting material for further genetic/genomic analysis. The availability of such huge amount of information on plant, animal, and microbial genetic resources will pave the way for the dissection of the morpho-physiological and molecular mechanisms of adaptation to climate change. BioMemory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project is aimed to create a network of biobanks (i.e., scientific research collections) where data and metadata associated to biological samples of different nature are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for a number of purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals and plants.
| Título | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
|---|---|
| Identificador | PNRR Project IR0000032 | CNR SAC.AD002.173 |
| Fuentes de Financiación | ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BioMemory (CNR-DiSBA Project No. SAC.AD002.173 |
Personas asociadas al proyecto:
Datos de la colección
| Nombre de la Colección | IPSP Forest Tree Fungal Collection (CNR-IPSP-FTFC) |
|---|---|
| Identificador de la Colección | 6635259a-e0c9-436e-af0f-7a4a62217bf9 |
| Métodos de preservación de los ejemplares | Congelado, Refrigerado, Glicerina, Otro |
|---|
Metadatos adicionales
Data and samples collected and analyzed within the following research projects: Partner of MIRRI Italian Node (http://www.mirri-it.it); involved in CNR BioGenRes (http://www.biogenres.cnr.it/); Life Mycorestore (LIFE18 CCA/IT/001110)
| Propósito | Plant Pathology, Biocontrol agents, Forestry |
|---|---|
| Descripción de mantenimiento | Cryo: Freezer at -20°C, in cryovials with spore suspension or with mycelium plug in water glycerol (50% v/V) or in pure water. Fresh cultures: Refrigerator at 4°C in agar slants with mycelium. |
| Identificadores alternativos | https://ipt.ibbr.cnr.it/ipt/resource?r=ipsp-ftfc |