Description
A total of 192 populations of Quercus cerris from the eastern Mediterranean Basin (Italy, Balkan peninsula, Anatolia) were genotyped with six polymorphic chloroplast microsatellites, and the genetic diversity and differentiation of the populations were evaluated. DNA samples are kept in collection at -20° C and available for research use only.
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 1 175 enregistrements.
2 tableurs de données d'extension existent également. Un enregistrement d'extension fournit des informations supplémentaires sur un enregistrement du cœur de standard (core). Le nombre d'enregistrements dans chaque tableur de données d'extension est illustré ci-dessous.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
Bagnoli F, Spanu I, Avanzi C, Vendramin GG, Piotti A (2024). Quercus cerris populations from Central-Eastern Europe and Middle East (IBBR-QUERCUS-CERRIS). Institute of Biosciences and Bioresources (IBBR), National Research Council of Italy (CNR). Occurrence dataset v.1.2. - doi: https://doi.org/10.15468/qwefvq
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Ce travail est sous licence Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : 3a80944e-06ce-4226-ac9f-052ff0dcbd97. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du DiSSCo.
Mots-clé
Occurrence; Specimen; Quercus cerris L.; Turkey oaks; Intraspecific biodiversity; Range-wide genetic variability; Forest tree populations
Données externes
Les données de la ressource sont disponibles dans d'autres formats
API JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=148 UTF-8 Darwin Core |
---|
Contacts
- Créateur ●
- Personne De Contact
- Researcher
- v. Madonna del Piano 10
- Créateur
- Researcher
- v. Madonna del Piano 10
- Créateur
- Researcher
- v. Madonna del Piano 10
- Créateur
- Research Director
- v. Madonna del Piano 10
- Créateur
- Researcher
- v. Madonna del Piano 10
- Fournisseur Des Métadonnées
- Senior Researcher
- v. Madonna del Piano 10
- Fournisseur Des Métadonnées
- Senior Technologist
- v. F. De Blasio 5
- Fournisseur De Contenu
- Research Institute
- v. Madonna del Piano 10
- Publicateur
Couverture géographique
Central Europe, Eastern Europe, Balkan peninsula, Middle East (Italy, Hungary, Slovakia, Serbia, Turkey, Bulgaria, Macedonia, Albania, Croatia, Romania, Bosnia, Slovenia, Greece, Austria, Lebanon, Ukraine, Montenegro)
Enveloppe géographique | Sud Ouest [33,783, 8,636], Nord Est [49,367, 37,4] |
---|
Couverture taxonomique
Quercus cerris L., Turkey oak
Kingdom | Plantae |
---|---|
Phylum | Tracheophyta |
Class | Magnoliopsida |
Order | Fagales |
Family | Fagaceae |
Couverture temporelle
Epoque de formation | 2014-2016 |
---|
Données sur le projet
ITINERIS - Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. || BioMemory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals, and plants.
Titre | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
---|---|
Identifiant | PNRR Project IR0000032 | CNR SAC.AD002.173 |
Financement | PNRR project IR0000032 - ITINERIS, Italian Integrated Environmental Research Infrastructures System - CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU - Next Generation EU - Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BioMemory (CNR-DiSBA Project No. SAC.AD002.173) |
Project Award |
ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100021856 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ |
Les personnes impliquées dans le projet:
Méthodes d'échantillonnage
Trees were randomly sampled from selected natural stands, with each population consisting of 42 to 50 individuals.
Etendue de l'étude | Central and Eastern European populations of Quercus cerris L. have been considered, along with several populations from Turkey, |
---|
Description des étapes de la méthode:
- None
Données de collection
Nom de la collection | DNA and samples for genetic analyses on forest trees (CNR-IBBR-DNAFOR) |
---|---|
Identifiant de collection | 90a41989-9906-41d4-aff9-0dc8420c7a45 |
Méthode de conservation des spécimens | Refrigerated |
---|
Citations bibliographiques
- Bagnoli, F., Tsuda, Y., Fineschi, S., Bruschi, P., Magri, D., Zhelev, P., Paule, L., Simeone, M.C., González-Martínez, S.C. and Vendramin, G.G. (2016), Combining molecular and fossil data to infer demographic history of Quercus cerris: insights on European eastern glacial refugia. J. Biogeogr., 43: 679-690. https://doi.org/10.1111/jbi.12673 https://doi.org/10.1111/jbi.12673
- Sebastiani, F., Carnevale, S. and Vendramin, G.G. (2004), A new set of mono- and dinucleotide chloroplast microsatellites in Fagaceae. Molecular Ecology Notes, 4: 259-261. https://doi.org/10.1111/j.1471-8286.2004.00635.x https://doi.org/10.1111/j.1471-8286.2004.00635.x
Métadonnées additionnelles
Population genetics, Infraspecific biodiversity, Phylogeography, Adaptation, Climate change
Objet | The dataset includes more than 1,100 records of cryopreserved DNA and tissue samples of several forest tree species collected during past and current national and EU projects. The aim is to investigate the genetic makeup of their populations and assess their infraspecific biodiversity across Europe, from the biogeographical to the local level. |
---|---|
Description de la fréquence de mise à jour | Tissues and DNA are stored at -20 °C. Updates will be included when new samples are collected. |
Identifiants alternatifs | 3a80944e-06ce-4226-ac9f-052ff0dcbd97 |
https://ipt.ibbr.cnr.it/ipt/resource?r=ibbr-quercus-cerris |