Abies alba natural populations of Italy and Balkans (IBBR-ABIES-ALBA)

Occurrence
Последняя версия опубликовано Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) февр. 18, 2025 Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR)
Домой:
https://biomemory.cnr.it/collections/cnr-ibbr-dnafor
Дата публикации:
18 февраля 2025 г.
Лицензия:
CC-BY 4.0

Скачайте последнюю версию данных этого ресурса в формате Darwin Core Archive (DwC-A) или метаданных ресурса в форматах EML или RTF:

Данные в формате DwC-A Скачать 1 167 Записи в English (530 KB) - Частота обновления: по мере необходимости
Метаданные в формате EML Скачать в English (26 KB)
Метаданные в формате RTF Скачать в English (14 KB)

Описание

Some 1168 silver fir trees from 24 natural populations sampled across italy and the Balkanian peninsula have been fully genotyped using a set of 16 SSR loci. Needles have been collected from georeferenced, individual trees in the forest, transported to the lab and kept at -80 °C for long-term storage. DNA has been extracted from each tissue sample for purpose of population genetic studies and evolutionary history reconstruction, and it is currently maintained at -20 *C for future research.

Записи данных

Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 1 167 записей.

Также в наличии 1 таблиц с данными расширений. Записи расширений содержат дополнительную информацию об основной записи. Число записей в каждой таблице данных расширения показано ниже.

Occurrence (core)
1167
Amplification 
18672

Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.

Версии

В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.

Как оформить ссылку

Исследователи должны дать ссылку на эту работу следующим образом:

Piotti A, Bagnoli F, Avanzi C, Spanu I, Vendramin G G, Postolache D, Brousseau L, Leonarduzzi C, Leonardi S, Bucci G, Ianigro M (2025). Abies alba natural populations of Italy and Balkans (IBBR-ABIES-ALBA). Version 1.2. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Occurrence dataset. https://doi.org/10.15468/3ccqf4

Права

Исследователи должны соблюдать следующие права:

Публикующей организацией и владельцем прав на данную работу является Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Эта работа находится под лицензией Creative Commons Attribution (CC-BY 4.0).

Регистрация в GBIF

Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: b039a7fc-9e9a-438e-9187-5ada8a69c5b3.  Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке DiSSCo.

Ключевые слова

Occurrence; Silver fir; Conservation; Forest trees; Abies alba; Genetic diversity; Gene flow; Specimen

Внешние данные

Ресурс также доступен в других форматах

JSON DwC Format https://biomemory.cnr.it/api/occurrences/json/?dataset=112 UTF8 JSON

Контакты

Andrea Piotti
  • Point Of Contact
  • Researcher
CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
  • v. Madonna del Piano 10
I-50019 Sesto Fiorentino
FI
IT
Francesca Bagnoli
  • Originator
  • Researcher
CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
  • v. Madonna del Piano 10
I-50019 Sesto Fiorentino
FI
IT
Camilla Avanzi
  • Originator
  • Researcher
CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
  • v. Madonna del Piano 10
I-50019 Sesto Fiorentino
FI
IT
Ilaria Spanu
  • Originator
  • Researcher
CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
  • v. Madonna del Piano 10
I-50019 Sesto Fiorentino
FI
IT
Giovanni Giuseppe Vendramin
  • Originator
  • Research Director
CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino, National Research Council of Italy
  • v. Madonna del Piano 10
I-50019 Sesto Fiorentino
FI
IT
Dragos Postolache
  • Originator
National Research and Development Institute in Forestry "Marin Dracea"
400275 Cluj-Napoca
RO
Louise Brousseau
  • Originator
INRA, UR629 URFM Ecologie des Forêts Méditerranéennes
  • Domaine Saint Paul
84914 Avignon Cedex 9
FR
Cristina Leonarduzzi
  • Originator
CNR-IBBR Institute of Biosciences and Bioresources, National Research Council of Italy
IT-50019 Sesto Fiorentino
FI
IT
Stefano Leonardi
  • Originator
University of Parma
43124 Parma
IT
Gabriele Bucci
  • Metadata Provider
  • Senior Researcher
CNR-IBBR, Institute of Biosciences and BioResources, National Research Council of Italy
  • v. Madonna del Piano 10
I-50019 Sesto Fiorentino
FI
Massimo Ianigro
  • Metadata Provider
  • Senior Technologist
CNR-IRSA-BA, Water Research Institute (IRSA) - Section of Bari, National Research Council of Italy
  • v. F. De Blasio 5
I-70132 Bari
BA
IT
Andrea Piotti
  • Point Of Contact
  • Reference Person
CNR-IBBR-FI, Institute of Biosciences and Bioresources (IBBR) - Section of Sesto Fiorentino
  • v. Madonna del Piano 10
I-50019 Sesto Fiorentino
FI
IT
Institute of Biosciences and BioResources CNR-IBBR
  • Content Provider
  • Research Institute
National Research Council of Italy (CNR)
  • v. Madonna del Piano 10
I-50019 Sesto Fiorentino
FI
IT
Dept. of Bio-Agrifood Sciences
  • Owner
National Research Council of Italy (CNR)
IT-00100 Rome
RM
IT

Географический охват

Italy, Romania, Bulgaria, Serbia

Ограничивающие координаты Юг Запад [38,144, 6,889], Север Восток [46,49, 24,696]

Таксономический охват

Natural populations of Abies alba Mill.

Kingdom Plantae
Phylum Tracheophyta
Class Pinopsida
Order Pinales
Family Pinaceae

Временной охват

Период формирования 2016-2017

Данные проекта

ITINERIS - Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. BioMemory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals, and plants.

Название ITINERIS - Italian Integrated Environmental Research Infrastructures System | BIOMEMORY Project
Идентификатор PNRR Project IR0000032 | CNR-DiSBA no. SAC.AD002.173
Финансирование PNRR project IR0000032 - ITINERIS, Italian Integrated Environmental Research Infrastructures System - CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU - Next Generation EU - Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BioMemory (CNR-DiSBA Project No. SAC.AD002.173)
Project Award BioMemory Project (CNR-DiSBA)
https://doi.org/10.13039/501100004462
Consiglio Nazionale delle Ricerche
CNR-DiSBA no. SAC.AD002.173
https://www.disba.cnr.it/en/

ITINERIS - Italian Integrated Environmental Research Infrastructures System
https://doi.org/10.13039/501100021856
Ministero dell'Università e della Ricerca
PNRR Project IR0000032
https://itineris.cnr.it/

Исполнители проекта:

Gabriele Bucci
  • Custodian Steward
Giovanni Giuseppe Vendramin
  • Principal Investigator
Eleonora Fornaro
  • Programmer
Marina Tumolo
  • Author
Domenico De Paola
  • Author
Massimo Ianigro
  • Programmer

Данные коллекции

Название коллекции DNA and samples for genetic analyses on forest trees (CNR-IBBR-DNAFOR)
Идентификатор коллекции 90a41989-9906-41d4-aff9-0dc8420c7a45
Методы сохранения образцов Deep frozen,  Dried

Библиографические ссылки

  1. Piotti, A., Leonarduzzi, C., Postolache, D., Bagnoli, F., Spanu, I., Brousseau, L., Urbinati, C., Leonardi, S. and Vendramin, G.G. (2017), Unexpected scenarios from Mediterranean refugial areas: disentangling complex demographic dynamics along the Apennine distribution of silver fir. Journal of Biogeography, 44: 1547-1558. https://doi.org/10.1111/jbi.13011
  2. Santini F., Andrisano T., Leonardi S., Ciaschetti G., Labriola M.C., Vendramin G.G., Piotti A. (2018). Tracking the origin of silver fir plantations along the boundary between different genetic clusters in central Apennines: Implications for their management. Forest Ecology and Management 408: 220-227. https://doi.org/10.1016/j.foreco.2017.10.045

Дополнительные метаданные

A sample of preserved material is available upon request for authors.

Acknowledgements

PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures”

CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being.
Цель

Population genetics, Infraspecific biodiversity, Phylogeography, Adaptation, Climate change
Описание частоты обновления ресурса Dried tissues and DNA at -20 °C
Альтернативные идентификаторы b039a7fc-9e9a-438e-9187-5ada8a69c5b3
https://ipt.ibbr.cnr.it/ipt/resource?r=ibbr-abies-alba