Description
Some 1168 silver fir trees from 24 natural populations sampled across italy and the Balkanian peninsula have been fully genotyped using a set of 16 SSR loci. Needles have been collected from georeferenced, individual trees in the forest, transported to the lab and kept at -80 °C for long-term storage. DNA has been extracted from each tissue sample for purpose of population genetic studies and evolutionary history reconstruction, and it is currently maintained at -20 *C for future research.
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 1 167 enregistrements.
1 tableurs de données d'extension existent également. Un enregistrement d'extension fournit des informations supplémentaires sur un enregistrement du cœur de standard (core). Le nombre d'enregistrements dans chaque tableur de données d'extension est illustré ci-dessous.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
Piotti A, Bagnoli F, Avanzi C, Spanu I, Vendramin G G, Postolache D, Brousseau L, Leonarduzzi C, Leonardi S, Bucci G, Ianigro M (2025). Abies alba natural populations of Italy and Balkans (IBBR-ABIES-ALBA). Version 1.2. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Occurrence dataset. https://doi.org/10.15468/3ccqf4
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Ce travail est sous licence Creative Commons Attribution (CC-BY) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : b039a7fc-9e9a-438e-9187-5ada8a69c5b3. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du DiSSCo.
Mots-clé
Occurrence; Silver fir; Conservation; Forest trees; Abies alba; Genetic diversity; Gene flow; Specimen
Données externes
Les données de la ressource sont disponibles dans d'autres formats
JSON DwC Format | https://biomemory.cnr.it/api/occurrences/json/?dataset=112 UTF8 JSON |
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Contacts
- Personne De Contact
- Researcher
- v. Madonna del Piano 10
- Créateur
- Researcher
- v. Madonna del Piano 10
- Créateur
- Researcher
- v. Madonna del Piano 10
- Créateur
- Researcher
- v. Madonna del Piano 10
- Créateur
- Research Director
- v. Madonna del Piano 10
- Créateur
- Créateur
- Domaine Saint Paul
- Créateur
- Fournisseur Des Métadonnées
- Senior Researcher
- v. Madonna del Piano 10
- Fournisseur Des Métadonnées
- Senior Technologist
- v. F. De Blasio 5
- Personne De Contact
- Reference Person
- v. Madonna del Piano 10
- Fournisseur De Contenu
- Research Institute
- v. Madonna del Piano 10
- Propriétaire
Couverture géographique
Italy, Romania, Bulgaria, Serbia
Enveloppe géographique | Sud Ouest [38,144, 6,889], Nord Est [46,49, 24,696] |
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Couverture taxonomique
Natural populations of Abies alba Mill.
Kingdom | Plantae |
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Phylum | Tracheophyta |
Class | Pinopsida |
Order | Pinales |
Family | Pinaceae |
Couverture temporelle
Epoque de formation | 2016-2017 |
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Données sur le projet
ITINERIS - Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. BioMemory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals, and plants.
Titre | ITINERIS - Italian Integrated Environmental Research Infrastructures System | BIOMEMORY Project |
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Identifiant | PNRR Project IR0000032 | CNR-DiSBA no. SAC.AD002.173 |
Financement | PNRR project IR0000032 - ITINERIS, Italian Integrated Environmental Research Infrastructures System - CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU - Next Generation EU - Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BioMemory (CNR-DiSBA Project No. SAC.AD002.173) |
Project Award |
BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100021856 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it/ |
Les personnes impliquées dans le projet:
Données de collection
Nom de la collection | DNA and samples for genetic analyses on forest trees (CNR-IBBR-DNAFOR) |
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Identifiant de collection | 90a41989-9906-41d4-aff9-0dc8420c7a45 |
Méthode de conservation des spécimens | Deep frozen, Dried |
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Citations bibliographiques
- Piotti, A., Leonarduzzi, C., Postolache, D., Bagnoli, F., Spanu, I., Brousseau, L., Urbinati, C., Leonardi, S. and Vendramin, G.G. (2017), Unexpected scenarios from Mediterranean refugial areas: disentangling complex demographic dynamics along the Apennine distribution of silver fir. Journal of Biogeography, 44: 1547-1558. https://doi.org/10.1111/jbi.13011
- Santini F., Andrisano T., Leonardi S., Ciaschetti G., Labriola M.C., Vendramin G.G., Piotti A. (2018). Tracking the origin of silver fir plantations along the boundary between different genetic clusters in central Apennines: Implications for their management. Forest Ecology and Management 408: 220-227. https://doi.org/10.1016/j.foreco.2017.10.045
Métadonnées additionnelles
A sample of preserved material is available upon request for authors.
Acknowledgements | PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being. |
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Objet | Population genetics, Infraspecific biodiversity, Phylogeography, Adaptation, Climate change |
Description de la fréquence de mise à jour | Dried tissues and DNA at -20 °C |
Identifiants alternatifs | b039a7fc-9e9a-438e-9187-5ada8a69c5b3 |
https://ipt.ibbr.cnr.it/ipt/resource?r=ibbr-abies-alba |