Описание
PLAVIT Collection preserves more than 1100 isolates (Plant Viruses, Viroids, Bacteriophages) collected mainly in Italy but also from other countries (Europe, Asia, Africa, and America), including 134 distinct viral species belonging to the main taxonomic groups. A limited number of non-mechanically transmissible viral species are stored as infectious clones at - 80° C. Preservation Techniques: (i) Dried leaves: lyophilized infected leaves are stored at -20°C; (ii) Liquid Nitrogen: infected leaves are stored in liquid nitrogen.
The PLAVIT collection is partner of MIRRI Italian Node (http://www.mirri-it.it) and partner of H2020 EU project EVA-GLOBAL (https://www.european-virus-archive.com). Since 2015, It is also member of ECCO (European Culture Collection Organization) and of WFCC (World Federation of Culture Collection - number 1057).
Записи данных
Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 438 записей.
Также в наличии 2 таблиц с данными расширений. Записи расширений содержат дополнительную информацию об основной записи. Число записей в каждой таблице данных расширения показано ниже.
Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.
Версии
В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.
Как оформить ссылку
Исследователи должны дать ссылку на эту работу следующим образом:
Accotto GP, Ciuffo M, Vaira A M, Birello G (2023). Plant Virus Italy - CNR-IPSP collection in Turin (CNR-IPSP-PLAVIT). Version 1.0. GBIF Secretariat. Occurrence dataset. https://www.gbif.org/grscicoll/collection/7b62ecf0-2d6e-4fc2-a22c-be7b674e690b
Права
Исследователи должны соблюдать следующие права:
Публикующей организацией и владельцем прав на данную работу является Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Эта работа находится под лицензией Creative Commons Attribution Non Commercial (CC-BY-NC 4.0).
Регистрация в GBIF
Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: 4f929122-4e6e-4b51-8647-c6b947c038d1. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке DiSSCo.
Ключевые слова
Occurrence; Agriculture; Biocontrol agents; Diagnosis; Pest risk assessment; Biotechnology; Biodiversity; Health; Specimen
Внешние данные
Ресурс также доступен в других форматах
| API JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=142 UTF-8 Darwin Core |
|---|---|
| SUS-MIRRI | https://www.sus-mirri.it/ UTF-8 HTML |
Контакты
- Point Of Contact
- Research Director
- Strada delle Cacce, 73
https://orcid.org/0000-0002-3825-1097
- Originator
- Curator and scientific responsible of the collection
- Strada delle Cacce, 73
- Originator
- Senior research scientist
- Strada delle Cacce, 73
- Originator
- Research Technician
- Strada delle Cacce, 73
- Metadata Provider
- Senior Researcher
- v. Madonna del Piano 10
- Metadata Provider
- Senior Technologist
- v. F. De Blasio 5
- Point Of Contact
- Reference Person
- Strada delle Cacce 73
- Content Provider
- Research Department
- p.le Aldo Moro 7
- Content Provider
- Research Institute
- Strada delle Cacce, 73
Географический охват
Europe, Asia, Africa and America
| Ограничивающие координаты | Юг Запад [-1,965, -102,008], Север Восток [54,702, 105] |
|---|
Таксономический охват
Описание отсутсвует
| Kingdom | Plantae, Viruses |
|---|---|
| Phylum | Cressdnaviricota, Lenarviricota, Tracheophyta, Artverviricota, Pisuviricota, Negarnaviricota, Kitrinoviricota |
| Class | Duplopiviricetes, Milneviricetes, Revtraviricetes, Miaviricetes, Monjiviricetes, Magnoliopsida, Ellioviricetes, Tolucaviricetes, Alsuviricetes, Repensiviricetes, Stelpaviricetes, Pisoniviricetes |
| Order | Bunyavirales, Geraniales, Patatavirales, Sobelivirales, Picornavirales, Serpentovirales, Tolivirales, Ortervirales, Martellivirales, Durnavirales, Tymovirales, Mononegavirales, Geplafuvirales, Ourlivirales |
| Family | Caulimoviridae, Alphaflexiviridae, Botourmiaviridae, Tymoviridae, Potyviridae, Solemoviridae, Betaflexiviridae, Geraniaceae, Geminiviridae, Tospoviridae, Virgaviridae, Aspiviridae, Bromoviridae, Rhabdoviridae, Secoviridae, Tombusviridae, Partitiviridae, Closteroviridae |
Временной охват
| Период формирования | 1905-2023 |
|---|
Данные проекта
ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity is aimed to provide biodiversity (meta)data linked to Natural Science Collections (NSC). Extended digital specimens will be linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.) in the frame of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) which have been created and maintained through past and current research projects. Reference to genetic/genomic data for each specimen will allow for the identification of the most interesting material for further genetic/genomic analysis. BioMemory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project is aimed to create a network of biobanks (i.e., scientific research collections) where data and metadata associated to biological samples of different nature are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for a number of purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals and plants.
| Название | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
|---|---|
| Идентификатор | PNRR Project IR0000032 | CNR SAC.AD002.173 |
| Финансирование | ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BioMemory (CNR-DiSBA Project No. SAC.AD002.173) - CNR-DiSBA - Department of Bio-Agrofood Sciences, National Research Council of Italy |
| Project Award |
BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100004462 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it/ |
Исполнители проекта:
Данные коллекции
| Название коллекции | Plant Virus Italy |
|---|---|
| Идентификатор коллекции | 7b62ecf0-2d6e-4fc2-a22c-be7b674e690b |
| Методы сохранения образцов | Deep frozen, Other |
|---|
Дополнительные метаданные
Data and samples were collected and analyzed within the following research projects: MIRRI (http://www.mirri-it.it); H2020 EU project EVA-GLOBAL (www.european-virus-archive.com); EU project SUS-MIRRI (https://www.sus-mirri.it/).
| Acknowledgements | PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being. |
|---|---|
| Цель | Agriculture, Biocontrol agents, Diagnosis, Pest risk assessment, Biotechnology, Biodiversity, Health |
| Описание частоты обновления ресурса | Dried leaves: lyophilised infected leaves stored at -20°C; Liquid Nitrogen: infected leaves stored in liquid nitrogen |
| Альтернативные идентификаторы | 4f929122-4e6e-4b51-8647-c6b947c038d1 |
| https://ipt.ibbr.cnr.it/ipt/resource?r=plavit-01 |