Description
PLAVIT Collection preserves more than 1100 isolates (Plant Viruses, Viroids, Bacteriophages) collected mainly in Italy but also from other countries (Europe, Asia, Africa, and America), including 134 distinct viral species belonging to the main taxonomic groups. A limited number of non-mechanically transmissible viral species are stored as infectious clones at - 80° C. Preservation Techniques: (i) Dried leaves: lyophilized infected leaves are stored at -20°C; (ii) Liquid Nitrogen: infected leaves are stored in liquid nitrogen.
The PLAVIT collection is partner of MIRRI Italian Node (http://www.mirri-it.it) and partner of H2020 EU project EVA-GLOBAL (https://www.european-virus-archive.com). Since 2015, It is also member of ECCO (European Culture Collection Organization) and of WFCC (World Federation of Culture Collection - number 1057).
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 438 enregistrements.
2 tableurs de données d'extension existent également. Un enregistrement d'extension fournit des informations supplémentaires sur un enregistrement du cœur de standard (core). Le nombre d'enregistrements dans chaque tableur de données d'extension est illustré ci-dessous.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
Accotto GP, Ciuffo M, Vaira A M, Birello G (2023). Plant Virus Italy - CNR-IPSP collection in Turin (CNR-IPSP-PLAVIT). Version 1.0. GBIF Secretariat. Occurrence dataset. https://www.gbif.org/grscicoll/collection/7b62ecf0-2d6e-4fc2-a22c-be7b674e690b
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Ce travail est sous licence Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : 4f929122-4e6e-4b51-8647-c6b947c038d1. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du DiSSCo.
Mots-clé
Occurrence; Agriculture; Biocontrol agents; Diagnosis; Pest risk assessment; Biotechnology; Biodiversity; Health; Specimen
Données externes
Les données de la ressource sont disponibles dans d'autres formats
| API JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=142 UTF-8 Darwin Core |
|---|---|
| SUS-MIRRI | https://www.sus-mirri.it/ UTF-8 HTML |
Contacts
- Personne De Contact
- Research Director
- Strada delle Cacce, 73
https://orcid.org/0000-0002-3825-1097
- Créateur
- Curator and scientific responsible of the collection
- Strada delle Cacce, 73
- Créateur
- Senior research scientist
- Strada delle Cacce, 73
- Créateur
- Research Technician
- Strada delle Cacce, 73
- Fournisseur Des Métadonnées
- Senior Researcher
- v. Madonna del Piano 10
- Fournisseur Des Métadonnées
- Senior Technologist
- v. F. De Blasio 5
- Personne De Contact
- Reference Person
- Strada delle Cacce 73
- Fournisseur De Contenu
- Research Department
- p.le Aldo Moro 7
- Fournisseur De Contenu
- Research Institute
- Strada delle Cacce, 73
Couverture géographique
Europe, Asia, Africa and America
| Enveloppe géographique | Sud Ouest [-1,965, -102,008], Nord Est [54,702, 105] |
|---|
Couverture taxonomique
Pas de description disponible
| Kingdom | Plantae, Viruses |
|---|---|
| Phylum | Cressdnaviricota, Lenarviricota, Tracheophyta, Artverviricota, Pisuviricota, Negarnaviricota, Kitrinoviricota |
| Class | Duplopiviricetes, Milneviricetes, Revtraviricetes, Miaviricetes, Monjiviricetes, Magnoliopsida, Ellioviricetes, Tolucaviricetes, Alsuviricetes, Repensiviricetes, Stelpaviricetes, Pisoniviricetes |
| Order | Bunyavirales, Geraniales, Patatavirales, Sobelivirales, Picornavirales, Serpentovirales, Tolivirales, Ortervirales, Martellivirales, Durnavirales, Tymovirales, Mononegavirales, Geplafuvirales, Ourlivirales |
| Family | Caulimoviridae, Alphaflexiviridae, Botourmiaviridae, Tymoviridae, Potyviridae, Solemoviridae, Betaflexiviridae, Geraniaceae, Geminiviridae, Tospoviridae, Virgaviridae, Aspiviridae, Bromoviridae, Rhabdoviridae, Secoviridae, Tombusviridae, Partitiviridae, Closteroviridae |
Couverture temporelle
| Epoque de formation | 1905-2023 |
|---|
Données sur le projet
ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity is aimed to provide biodiversity (meta)data linked to Natural Science Collections (NSC). Extended digital specimens will be linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.) in the frame of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) which have been created and maintained through past and current research projects. Reference to genetic/genomic data for each specimen will allow for the identification of the most interesting material for further genetic/genomic analysis. BioMemory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project is aimed to create a network of biobanks (i.e., scientific research collections) where data and metadata associated to biological samples of different nature are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for a number of purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals and plants.
| Titre | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
|---|---|
| Identifiant | PNRR Project IR0000032 | CNR SAC.AD002.173 |
| Financement | ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BioMemory (CNR-DiSBA Project No. SAC.AD002.173) - CNR-DiSBA - Department of Bio-Agrofood Sciences, National Research Council of Italy |
| Project Award |
BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100004462 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it/ |
Les personnes impliquées dans le projet:
Données de collection
| Nom de la collection | Plant Virus Italy |
|---|---|
| Identifiant de collection | 7b62ecf0-2d6e-4fc2-a22c-be7b674e690b |
| Méthode de conservation des spécimens | Deep frozen, Other |
|---|
Métadonnées additionnelles
Data and samples were collected and analyzed within the following research projects: MIRRI (http://www.mirri-it.it); H2020 EU project EVA-GLOBAL (www.european-virus-archive.com); EU project SUS-MIRRI (https://www.sus-mirri.it/).
| Acknowledgements | PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being. |
|---|---|
| Objet | Agriculture, Biocontrol agents, Diagnosis, Pest risk assessment, Biotechnology, Biodiversity, Health |
| Description de la fréquence de mise à jour | Dried leaves: lyophilised infected leaves stored at -20°C; Liquid Nitrogen: infected leaves stored in liquid nitrogen |
| Identifiants alternatifs | 4f929122-4e6e-4b51-8647-c6b947c038d1 |
| https://ipt.ibbr.cnr.it/ipt/resource?r=plavit-01 |