Описание
The ISA01-CC dataset includes about 300 strains of lactic acid bacteria and 400 strains of yeasts. The strains are mainly isolated from the Mediterranean agro-food systems and typical fermented foods (sourdough, dairy products, wine and grape, cereals, whey) and human faeces. The main species collected among lactic acid bacteria are: Levilactobacillus brevis, Companilactobacillus alimentarius, Leuconostoc pseudomesenteroides, Fructilactobacillus sanfranciscensis, Lacticaseibacillus casei, Lacticaseibacillus rhamnosus, etc. The main species collected among yeasts are Saccharomyces cerevisiae, Hanseniaspora guilliermondii, H. uvarum, Pichia kudriavzevii, Met. fructicula.
Записи данных
Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 318 записей.
Также в наличии 3 таблиц с данными расширений. Записи расширений содержат дополнительную информацию об основной записи. Число записей в каждой таблице данных расширения показано ниже.
Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.
Версии
В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.
Как оформить ссылку
Исследователи должны дать ссылку на эту работу следующим образом:
d’Acierno A, Nazzaro F, Reale A, Sorrentino A, Rossi M, Pascale M (2024). CNR-ISA Agri-food Microorganism Dataset (ISA01-CC), version 1.1. Institute for Food Sciences, Department of Bio-Agri-Food Sciences, National Research Council of Italy, Avellino, Italy. Occurrence dataset https://doi.org/10.15468/2ze5cv
Права
Исследователи должны соблюдать следующие права:
Публикующей организацией и владельцем прав на данную работу является Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Эта работа находится под лицензией Creative Commons Attribution Non Commercial (CC-BY-NC 4.0).
Регистрация в GBIF
Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: aebc4372-55b7-4ddf-8bd1-5693eb67e8b3. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке DiSSCo.
Ключевые слова
Occurrence; Lactobacillus; Hanseniaspora uvarum; Saccharomyces cerevisiae; Issatchenkia orientalis; Kluyveromyces marxianus; Metschnikowia fructicola; Metschnikowia pulcherrima; Debaryomyces delbrueckii; Bacteria; Yeasts; Culture Strains; Specimen; Food; Functional Foods; Nutraceuticals; Health; Biocontrol agents; Biofuel
Внешние данные
Ресурс также доступен в других форматах
| API JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=113 UTF-8 JSON |
|---|
Контакты
- Originator
- Researcher
- v. Roma 64
https://orcid.org/0000-0003-0516-0794
- Originator
- Research director
- v. Roma 64
- Originator
- Responsible for molecular identification
- v. Roma 64
- Originator
- Researcher
- v. Roma 64
- Originator
- Research Director
- v. Roma 64
- Metadata Provider
- Senior Researcher
- v. Madonna del Piano 10
- Metadata Provider
- Senior Technologist
- v. F. De Blasio 5
- Point Of Contact
- Director of the Collection
- v. Roma 64
- Content Provider
- Research Department
Географический охват
Italy
| Ограничивающие координаты | Юг Запад [36,529, 6,519], Север Восток [47,103, 18,536] |
|---|
Таксономический охват
Lactic acid bacteria belonging to the following genera: Lactobacillus, Companilactobacillus, Lacticaseibacillus, Latilactobacillus, Lactiplantibacillus, Furfurilactobacillus, Limosilactobacillus, Fructilactobacillus, Levilactobacillus, Leuconostoc, Weissella and Pediococcus. Yeasts belonging to genera: Hanseniaspora, Rhodotorula, Metschnikowia and Pichia.
| Kingdom | Fungi, Bacteria |
|---|---|
| Phylum | Firmicutes, Actinobacteriota, Ascomycota, Bacillota |
| Class | Actinomycetia, Bacilli, Saccharomycetes |
| Order | Saccharomycetales, Actinomycetales, Lactobacillales |
| Family | Micrococcaceae, Saccharomycetaceae, Saccharomycodaceae, Pichiaceae, Metschnikowiaceae, Lactobacillaceae |
Временной охват
| Период формирования | 2015-current |
|---|
Данные проекта
ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored systematically and well-organized. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals, and plants.
| Название | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
|---|---|
| Идентификатор | PNRR Project IR0000032 || CNR-DiSBA no. SAC.AD002.173 |
| Финансирование | ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173 |
| Project Award |
BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100004462 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it/ |
| Related Projects |
Strengthening the MIRRI Italian Research Infrastructure for Sustainable Bioscience and Bioeconomy https://www.sus-mirri.it/ |
Исполнители проекта:
Данные коллекции
| Название коллекции | ISA Culture Collection (CNR-ISA-CC) |
|---|---|
| Идентификатор коллекции | 04f88630-cb9a-42f6-b46b-c1f2f9a9d430 |
| Методы сохранения образцов | Deep frozen, Refrigerated, Other |
|---|
Дополнительные метаданные
Samples collected and analyzed within the following research projects: MIRRI-IT (https://www.mirri-it.it/), SUS-MIRRI (https://www.sus-mirri.it/)
| Acknowledgements | PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being. |
|---|---|
| Цель | Food, Functional Foods, Nutraceuticals, Health, Biocontrol agents, Biofuel |
| Описание частоты обновления ресурса | Cryo: For lactic acid bacteria, ultrafrezeer at- 80 °C and -20 °C in cryovials with cells in MRS broth medium and glycerol (20% v/v); For yeasts, -20 °C, in cryovials with specific medium (YPDb) and glycerol (20%). Fresh cultures: For lactic acid bacteria, refrigerator at 4°C in MRS soft agar medium; for yeasts, refrigeration at 4 °C in slant of YPD medium. |
| Альтернативные идентификаторы | aebc4372-55b7-4ddf-8bd1-5693eb67e8b3 |
| https://ipt.ibbr.cnr.it/ipt/resource?r=isa01-cc |