Description
The ISA01-CC dataset includes about 300 strains of lactic acid bacteria and 400 strains of yeasts. The strains are mainly isolated from the Mediterranean agro-food systems and typical fermented foods (sourdough, dairy products, wine and grape, cereals, whey) and human faeces. The main species collected among lactic acid bacteria are: Levilactobacillus brevis, Companilactobacillus alimentarius, Leuconostoc pseudomesenteroides, Fructilactobacillus sanfranciscensis, Lacticaseibacillus casei, Lacticaseibacillus rhamnosus, etc. The main species collected among yeasts are Saccharomyces cerevisiae, Hanseniaspora guilliermondii, H. uvarum, Pichia kudriavzevii, Met. fructicula.
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 318 enregistrements.
3 tableurs de données d'extension existent également. Un enregistrement d'extension fournit des informations supplémentaires sur un enregistrement du cœur de standard (core). Le nombre d'enregistrements dans chaque tableur de données d'extension est illustré ci-dessous.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
d’Acierno A, Nazzaro F, Reale A, Sorrentino A, Rossi M, Pascale M (2024). CNR-ISA Agri-food Microorganism Dataset (ISA01-CC), version 1.1. Institute for Food Sciences, Department of Bio-Agri-Food Sciences, National Research Council of Italy, Avellino, Italy. Occurrence dataset https://doi.org/10.15468/2ze5cv
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Ce travail est sous licence Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : aebc4372-55b7-4ddf-8bd1-5693eb67e8b3. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du DiSSCo.
Mots-clé
Occurrence; Lactobacillus; Hanseniaspora uvarum; Saccharomyces cerevisiae; Issatchenkia orientalis; Kluyveromyces marxianus; Metschnikowia fructicola; Metschnikowia pulcherrima; Debaryomyces delbrueckii; Bacteria; Yeasts; Culture Strains; Specimen; Food; Functional Foods; Nutraceuticals; Health; Biocontrol agents; Biofuel
Données externes
Les données de la ressource sont disponibles dans d'autres formats
| API JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=113 UTF-8 JSON |
|---|
Contacts
- Créateur
- Researcher
- v. Roma 64
https://orcid.org/0000-0003-0516-0794
- Créateur
- Research director
- v. Roma 64
- Créateur
- Responsible for molecular identification
- v. Roma 64
- Créateur
- Researcher
- v. Roma 64
- Créateur
- Research Director
- v. Roma 64
- Fournisseur Des Métadonnées
- Senior Researcher
- v. Madonna del Piano 10
- Fournisseur Des Métadonnées
- Senior Technologist
- v. F. De Blasio 5
- Personne De Contact
- Director of the Collection
- v. Roma 64
- Fournisseur De Contenu
- Research Department
Couverture géographique
Italy
| Enveloppe géographique | Sud Ouest [36,529, 6,519], Nord Est [47,103, 18,536] |
|---|
Couverture taxonomique
Lactic acid bacteria belonging to the following genera: Lactobacillus, Companilactobacillus, Lacticaseibacillus, Latilactobacillus, Lactiplantibacillus, Furfurilactobacillus, Limosilactobacillus, Fructilactobacillus, Levilactobacillus, Leuconostoc, Weissella and Pediococcus. Yeasts belonging to genera: Hanseniaspora, Rhodotorula, Metschnikowia and Pichia.
| Kingdom | Fungi, Bacteria |
|---|---|
| Phylum | Firmicutes, Actinobacteriota, Ascomycota, Bacillota |
| Class | Actinomycetia, Bacilli, Saccharomycetes |
| Order | Saccharomycetales, Actinomycetales, Lactobacillales |
| Family | Micrococcaceae, Saccharomycetaceae, Saccharomycodaceae, Pichiaceae, Metschnikowiaceae, Lactobacillaceae |
Couverture temporelle
| Epoque de formation | 2015-current |
|---|
Données sur le projet
ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored systematically and well-organized. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals, and plants.
| Titre | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
|---|---|
| Identifiant | PNRR Project IR0000032 || CNR-DiSBA no. SAC.AD002.173 |
| Financement | ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173 |
| Project Award |
BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100004462 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it/ |
| Related Projects |
Strengthening the MIRRI Italian Research Infrastructure for Sustainable Bioscience and Bioeconomy https://www.sus-mirri.it/ |
Les personnes impliquées dans le projet:
Données de collection
| Nom de la collection | ISA Culture Collection (CNR-ISA-CC) |
|---|---|
| Identifiant de collection | 04f88630-cb9a-42f6-b46b-c1f2f9a9d430 |
| Méthode de conservation des spécimens | Deep frozen, Refrigerated, Other |
|---|
Métadonnées additionnelles
Samples collected and analyzed within the following research projects: MIRRI-IT (https://www.mirri-it.it/), SUS-MIRRI (https://www.sus-mirri.it/)
| Acknowledgements | PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being. |
|---|---|
| Objet | Food, Functional Foods, Nutraceuticals, Health, Biocontrol agents, Biofuel |
| Description de la fréquence de mise à jour | Cryo: For lactic acid bacteria, ultrafrezeer at- 80 °C and -20 °C in cryovials with cells in MRS broth medium and glycerol (20% v/v); For yeasts, -20 °C, in cryovials with specific medium (YPDb) and glycerol (20%). Fresh cultures: For lactic acid bacteria, refrigerator at 4°C in MRS soft agar medium; for yeasts, refrigeration at 4 °C in slant of YPD medium. |
| Identifiants alternatifs | aebc4372-55b7-4ddf-8bd1-5693eb67e8b3 |
| https://ipt.ibbr.cnr.it/ipt/resource?r=isa01-cc |