Описание
The dataset includes Ascomycetous fungi isolated from forest and urban trees (Ophiostoma ulmi, O.novo-ulmi , Ceratocystis platani, Diplodia sapinea, Botryosphaericeae) and oomycetes isolated in ornamental nursery (Pythium, Phytophthora, Mortariella). The CNR-IPSP-FPOFUAOPWS collection preserves about 1500 strains for research purposes, also includes strains from collections of other Research centers or Universities. The strains are mainly isolated from plant tissues in different geographical areas. Preservation techniques: (i) CRYO: Freezer at -20 °C, in cryovials with spore suspension or with mycelium plug in water glycerol (50% v/v) or in pure water; (ii) FRESH CULTURES: Refrigerator at 4 °C in agar slants with mycelium. The ultimate goals of the collection are: taxonomical Identification (morphological, molecular), molecular typing; isolation, preservation and cultivation of microorganisms; population genetic studies; genetic and phenotypic variability; host-pathogen interaction; inoculation for disease resistance; biocontrol; ecological and physiology studies, biochemical characterization. The collection is a partner of the MIRRI Italian Node (https://www.mirri-it.it).
Записи данных
Данные этого occurrence ресурса были опубликованы в виде Darwin Core Archive (DwC-A), который является стандартным форматом для обмена данными о биоразнообразии в виде набора из одной или нескольких таблиц. Основная таблица данных содержит 134 записей.
Также в наличии 3 таблиц с данными расширений. Записи расширений содержат дополнительную информацию об основной записи. Число записей в каждой таблице данных расширения показано ниже.
Данный экземпляр IPT архивирует данные и таким образом служит хранилищем данных. Данные и метаданные ресурсов доступны для скачивания в разделе Загрузки. В таблице версий перечислены другие версии ресурса, которые были доступны публично, что позволяет отслеживать изменения, внесенные в ресурс с течением времени.
Версии
В таблице ниже указаны только опубликованные версии ресурса, которые доступны для свободного скачивания.
Как оформить ссылку
Исследователи должны дать ссылку на эту работу следующим образом:
Luchi N, Santini A, Migliorini D, Pepori AL, Pecori F (2022). CNR-IPSP Tree Fungal Pathogens Dataset (collection CNR-IPSP-FPOFUAOPWS). Version 1.0. GBIF Secretariat. Occurrence dataset. - doi: https://doi.org/10.15468/2wsrke
Права
Исследователи должны соблюдать следующие права:
Публикующей организацией и владельцем прав на данную работу является Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Эта работа находится под лицензией Creative Commons Attribution Non Commercial (CC-BY-NC 4.0).
Регистрация в GBIF
Этот ресурс был зарегистрирован в GBIF, ему был присвоен следующий UUID: 36075f43-5d48-4346-a82c-99bce4f02389. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) отвечает за публикацию этого ресурса, и зарегистрирован в GBIF как издатель данных при оподдержке DiSSCo.
Ключевые слова
Occurrence; Plant pathology; Tree species; Forestry; Ophiostoma ulmi; Ophiostoma himal-ulmi; Ophiostoma quercus; Ophiostoma sp.; Specimen
Внешние данные
Ресурс также доступен в других форматах
| API-JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=107 UTF-8 Darwin Core |
|---|
Контакты
- Point Of Contact
- Curator and scientific responsible for the molecular characterization of the collection
- Via Madonna del Piano 10
https://orcid.org/0000-0003-3119-7574
- Originator
- Curator and scientific responsible of the collection
- Via Madonna del Piano 10
- Originator
- Molecular characterization and responsible of database collection
- Via Madonna del Piano 10
- Originator
- Responsible for molecular characterization and strain preservation
- Via Madonna del Piano 10
- Originator
- Responsible for molecular characterization and micropropagation
- Via Madonna del Piano 10
- Metadata Provider
- Senior Researcher
- v. Madonna del Piano 10
- Point Of Contact
- Reference Person
- Via Madonna del Piano 10
- Metadata Provider
- Research Department
- p.le Aldo Moro 7
- Content Provider
Географический охват
Italy
| Ограничивающие координаты | Юг Запад [38,154, 10,005], Север Восток [44,227, 14,617] |
|---|
Таксономический охват
Ascomycetous fungi isolated from forest and urban trees (Ophiostoma ulmi, O.novo-ulmi, Ceratocystis platani, Diplodia sapinea, Botryosphaericeae) and oomycetes isolated in ornamental nursery (Pythium, Phytophthora, Mortariella).
| Kingdom | Fungi |
|---|---|
| Phylum | Ascomycota |
| Class | Sordariomycetes |
| Order | Ophiostomatales |
| Family | Ophiostomataceae |
Временной охват
| Период формирования | 1999-present |
|---|
Данные проекта
ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) and related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. || BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals and plants.
| Название | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
|---|---|
| Идентификатор | PNRR Project IR0000032 || CNR-DiSBA no. SAC.AD002.173 |
| Финансирование | ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” || BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173 |
| Project Award |
BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100004462 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it/ |
Исполнители проекта:
Данные коллекции
| Название коллекции | CNR-IPSP-FPOFUAOPWS - Fungal Pathogens of Forest, Urban and Ornamental Plant Woody Species |
|---|---|
| Идентификатор коллекции | 3266e65b-77cb-4d96-9ba8-5f392445f867 |
| Методы сохранения образцов | Refrigerated, Glycerin |
|---|
Дополнительные метаданные
The collection participates in the MIRRI Italian Node (https://www.mirri-it.it) and has been involved in the CNR project "BioGenRes" (http://www.biogenres.cnr.it/).
| Acknowledgements | PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being. |
|---|---|
| Цель | Taxonomical Identification through morphological and molecular characterization of specimens; molecular typing; isolation, preservation, and cultivation of microorganisms; population genetic studies; genetic and phenotypic variability; host-pathogen interaction; inoculation for disease resistance; biocontrol; ecological and physiology studies, biochemical characterization; plant pathology, agriculture, forestry |
| Описание частоты обновления ресурса | CRYO: Freezer at -20 °C, in cryovials with spore suspension or with mycelium plug in water glycerol (50% v/v) or in pure water. FRESH CULTURES: Refrigerator at 4 °C in agar slants with mycelium. |
| Альтернативные идентификаторы | 36075f43-5d48-4346-a82c-99bce4f02389 |
| https://ipt.ibbr.cnr.it/ipt/resource?r=cnr-ipsp-tree-fungal-pathogens |