Description
The dataset includes Ascomycetous fungi isolated from forest and urban trees (Ophiostoma ulmi, O.novo-ulmi , Ceratocystis platani, Diplodia sapinea, Botryosphaericeae) and oomycetes isolated in ornamental nursery (Pythium, Phytophthora, Mortariella). The CNR-IPSP-FPOFUAOPWS collection preserves about 1500 strains for research purposes, also includes strains from collections of other Research centers or Universities. The strains are mainly isolated from plant tissues in different geographical areas. Preservation techniques: (i) CRYO: Freezer at -20 °C, in cryovials with spore suspension or with mycelium plug in water glycerol (50% v/v) or in pure water; (ii) FRESH CULTURES: Refrigerator at 4 °C in agar slants with mycelium. The ultimate goals of the collection are: taxonomical Identification (morphological, molecular), molecular typing; isolation, preservation and cultivation of microorganisms; population genetic studies; genetic and phenotypic variability; host-pathogen interaction; inoculation for disease resistance; biocontrol; ecological and physiology studies, biochemical characterization. The collection is a partner of the MIRRI Italian Node (https://www.mirri-it.it).
Enregistrements de données
Les données de cette ressource occurrence ont été publiées sous forme d'une Archive Darwin Core (Darwin Core Archive ou DwC-A), le format standard pour partager des données de biodiversité en tant qu'ensemble d'un ou plusieurs tableurs de données. Le tableur de données du cœur de standard (core) contient 134 enregistrements.
3 tableurs de données d'extension existent également. Un enregistrement d'extension fournit des informations supplémentaires sur un enregistrement du cœur de standard (core). Le nombre d'enregistrements dans chaque tableur de données d'extension est illustré ci-dessous.
Cet IPT archive les données et sert donc de dépôt de données. Les données et métadonnées de la ressource sont disponibles pour téléchargement dans la section téléchargements. Le tableau des versions liste les autres versions de chaque ressource rendues disponibles de façon publique et permet de tracer les modifications apportées à la ressource au fil du temps.
Versions
Le tableau ci-dessous n'affiche que les versions publiées de la ressource accessibles publiquement.
Comment citer
Les chercheurs doivent citer cette ressource comme suit:
Luchi N, Santini A, Migliorini D, Pepori AL, Pecori F (2022). CNR-IPSP Tree Fungal Pathogens Dataset (collection CNR-IPSP-FPOFUAOPWS). Version 1.0. GBIF Secretariat. Occurrence dataset. - doi: https://doi.org/10.15468/2wsrke
Droits
Les chercheurs doivent respecter la déclaration de droits suivante:
L’éditeur et détenteur des droits de cette ressource est Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Ce travail est sous licence Creative Commons Attribution Non Commercial (CC-BY-NC) 4.0.
Enregistrement GBIF
Cette ressource a été enregistrée sur le portail GBIF, et possède l'UUID GBIF suivante : 36075f43-5d48-4346-a82c-99bce4f02389. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) publie cette ressource, et est enregistré dans le GBIF comme éditeur de données avec l'approbation du DiSSCo.
Mots-clé
Occurrence; Plant pathology; Tree species; Forestry; Ophiostoma ulmi; Ophiostoma himal-ulmi; Ophiostoma quercus; Ophiostoma sp.; Specimen
Données externes
Les données de la ressource sont disponibles dans d'autres formats
| API-JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=107 UTF-8 Darwin Core |
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Contacts
- Personne De Contact
- Curator and scientific responsible for the molecular characterization of the collection
- Via Madonna del Piano 10
https://orcid.org/0000-0003-3119-7574
- Créateur
- Curator and scientific responsible of the collection
- Via Madonna del Piano 10
- Créateur
- Molecular characterization and responsible of database collection
- Via Madonna del Piano 10
- Créateur
- Responsible for molecular characterization and strain preservation
- Via Madonna del Piano 10
- Créateur
- Responsible for molecular characterization and micropropagation
- Via Madonna del Piano 10
- Fournisseur Des Métadonnées
- Senior Researcher
- v. Madonna del Piano 10
- Personne De Contact
- Reference Person
- Via Madonna del Piano 10
- Fournisseur Des Métadonnées
- Research Department
- p.le Aldo Moro 7
- Fournisseur De Contenu
Couverture géographique
Italy
| Enveloppe géographique | Sud Ouest [38,154, 10,005], Nord Est [44,227, 14,617] |
|---|
Couverture taxonomique
Ascomycetous fungi isolated from forest and urban trees (Ophiostoma ulmi, O.novo-ulmi, Ceratocystis platani, Diplodia sapinea, Botryosphaericeae) and oomycetes isolated in ornamental nursery (Pythium, Phytophthora, Mortariella).
| Kingdom | Fungi |
|---|---|
| Phylum | Ascomycota |
| Class | Sordariomycetes |
| Order | Ophiostomatales |
| Family | Ophiostomataceae |
Couverture temporelle
| Epoque de formation | 1999-present |
|---|
Données sur le projet
ITINERIS (PNRR Project IR0000032) Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) and related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. || BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored in a systematic and well-organized way. Maintaining the existing collections will allow their future use for many purposes, from the genetic improvement of organisms to face environmental changes (climate-ready organisms) to the fight against epidemics and pandemics affecting humans, animals and plants.
| Titre | ITINERIS - Italian Integrated Environmental Research Infrastructures System / BIOMEMORY |
|---|---|
| Identifiant | PNRR Project IR0000032 || CNR-DiSBA no. SAC.AD002.173 |
| Financement | ITINERIS project no. IR0000032 — ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” || BIOMEMORY (CNR-DiSBA Project No. SAC.AD002.173 |
| Project Award |
BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100004462 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it/ |
Les personnes impliquées dans le projet:
Données de collection
| Nom de la collection | CNR-IPSP-FPOFUAOPWS - Fungal Pathogens of Forest, Urban and Ornamental Plant Woody Species |
|---|---|
| Identifiant de collection | 3266e65b-77cb-4d96-9ba8-5f392445f867 |
| Méthode de conservation des spécimens | Refrigerated, Glycerin |
|---|
Métadonnées additionnelles
The collection participates in the MIRRI Italian Node (https://www.mirri-it.it) and has been involved in the CNR project "BioGenRes" (http://www.biogenres.cnr.it/).
| Acknowledgements | PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being. |
|---|---|
| Objet | Taxonomical Identification through morphological and molecular characterization of specimens; molecular typing; isolation, preservation, and cultivation of microorganisms; population genetic studies; genetic and phenotypic variability; host-pathogen interaction; inoculation for disease resistance; biocontrol; ecological and physiology studies, biochemical characterization; plant pathology, agriculture, forestry |
| Description de la fréquence de mise à jour | CRYO: Freezer at -20 °C, in cryovials with spore suspension or with mycelium plug in water glycerol (50% v/v) or in pure water. FRESH CULTURES: Refrigerator at 4 °C in agar slants with mycelium. |
| Identifiants alternatifs | 36075f43-5d48-4346-a82c-99bce4f02389 |
| https://ipt.ibbr.cnr.it/ipt/resource?r=cnr-ipsp-tree-fungal-pathogens |