Description
The dataset contains about 2000 accessions of several species of Hordeum (barley) from the Mediterranean Germplasm seed bank in Bari (Italy). Seeds have been collected by the personnel of CNR-IBBR throughout the Mediterranean Basin (Spain, Italy, Greece, Cyprus, Morocco, Algeria, Tunisia, Egypt, etc.), middle East (Syria, Yemen, Iraq, Iran, etc.), and Eastern Africa (Ethiopia), but also provenances from Asia (India, Nepal, etc.) are included. Seeds are maintained in sealed cans at -20 °C (long-term storage) and paper bags at 4 °C (short-term storage), and periodically checked for germination and refreshed. Seed lots are available upon request at https://ibbr.cnr.it/mgd/ or by contacting mgd.staff@ibbr.cnr.it.
Data Records
The data in this occurrence resource has been published as a Darwin Core Archive (DwC-A), which is a standardized format for sharing biodiversity data as a set of one or more data tables. The core data table contains 2,003 records.
This IPT archives the data and thus serves as the data repository. The data and resource metadata are available for download in the downloads section. The versions table lists other versions of the resource that have been made publicly available and allows tracking changes made to the resource over time.
Versions
The table below shows only published versions of the resource that are publicly accessible.
How to cite
Researchers should cite this work as follows:
Laghetti G, De Paola D, Stimolo L, Cataldo P, Scarascia M, Rapanà N, Giunta R, Direnzo P, Urbano M, Vendramin G G, Balestrini R, Bucci G, Ianigro M, Fornaro E, Tumolo M (2023). Mediterranean Germplasm Genebank - Hordeum dataset (ITA436-MGG-Hordeum). Version 1.4. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). Occurrence dataset.
Rights
Researchers should respect the following rights statement:
The publisher and rights holder of this work is Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR). This work is licensed under a Creative Commons Attribution Non Commercial (CC-BY-NC 4.0) License.
GBIF Registration
This resource has been registered with GBIF, and assigned the following GBIF UUID: f42db412-1aa0-4563-bcf1-308b61cd1971. Consiglio Nazionale delle Ricerche, Istituto di Bioscienze e BioRisorse (CNR-IBBR) publishes this resource, and is itself registered in GBIF as a data publisher endorsed by DiSSCo.
Keywords
Occurrence; Barley; Genebank; Agriculture; Food; Bioremediation; Biofuels; Pharma; Health; Specimen
External data
The resource data is also available in other formats
| API-JSON | https://biomemory.cnr.it/api/occurrences/json/?dataset=102 UTF-8 Darwin Core |
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Contacts
- Point Of Contact
- Senior Research Scientist
- v. Amendola 165/A
https://orcid.org/0000-0002-0892-3307
- Originator ●
- Point Of Contact
- Researcher
- v. Amendola 165/A
- Originator
- Technician/Metadata manager
- v. Amendola 165/A
- Originator
- Technician/Metadata Manager
- v. Amendola 165/A
- Originator
- Technician responsible for the collection storage
- v. Amendola 165/A
- Originator
- Technician
- v. Amendola 165/A
- Originator
- Technician
- v. Amendola 165/A
- Originator
- Technician
- v. Amendola 165/A
- Originator
- Researcher
- v. Amendola 165/A
- Originator
- Research Director
- v. Madonna del Piano 10
- Originator
- Institute Head - Reference person
- v. Amendola 165/A
- Metadata Provider
- Senior Researcher
- v. Madonna del Piano 10
- Metadata Provider
- Senior Technologist
- v. F. De Blasio 5
- Metadata Provider
- IT Technician
- v. G. Amendola 165/A
- Metadata Provider
- Technician
- Point Of Contact
- Reference Person
- v. Amendola 165/A
- Content Provider
- Research Institute
- v. G. Amendola 165/A
- Content Provider
Geographic Coverage
Italy, Spain, Greece, Mediterranean Basin, North Africa, Eastern Africa
| Bounding Coordinates | South West [5.15, -9.6], North East [46.86, 40.117] |
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Taxonomic Coverage
Hordeum vulgare, Hordeum murinum, Hordeum bulbosum, Hordeum maritimum, Hordeum sp. (Poaceae)
| Kingdom | Plantae |
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| Phylum | Tracheophyta |
| Class | Liliopsida |
| Order | Poales |
| Family | Poaceae |
Temporal Coverage
| Formation Period | 1971-present |
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Project Data
ITINERIS - Activity 6.5 "Mining and mapping the functional biodiversity in vivo and ex-situ research collections" - This activity aims to provide biodiversity (meta)data linked to Natural Science Collections (NSC) in terms of extended digital specimens fully linked to related information (e.g.. images and videos, codification of functional traits, DNA and protein sequences, environmental parameters, etc.). The expected outcome of the activity is the implementation of a national network of biological research collections, including all the existing in vivo and ex-situ collections of biological organisms (animals, plants, fungi, algae, archaea, bacteria, viruses, etc.) that have been created and maintained through past and current research projects. || BioMemory (CNR-DiSBA Project No. SAC.AD002.173) is the network of biological collections of the Department of Biology, Agriculture and Food Sciences (DiSBA) of the National Research Council of Italy (CNR) for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. The project aims to create a network of biobanks (i.e., scientific research collections) where data and metadata associated with biological samples of different natures are collected and stored systematically and well-organized.
| Title | ITINERIS - Italian Integrated Environmental Research Infrastructures System || BIOMEMORY Project |
|---|---|
| Identifier | PNRR Project IR0000032 || CNR-DiSBA no. SAC.AD002.173 |
| Funding | PNRR project IR0000032 - ITINERIS, Italian Integrated Environmental Research Infrastructures System - CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU - Next Generation EU - Mission 4 “Education and Research” - Component 2: “From research to business” - Investment 3.1: “Fund for the realisation of an integrated system of research and innovation infrastructures” || BioMemory (CNR-DiSBA Project No. SAC.AD002.173) - The Italian network of biological collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and human well-being. |
| Project Award |
BioMemory Project (CNR-DiSBA) https://doi.org/10.13039/501100004462 Consiglio Nazionale delle Ricerche CNR-DiSBA no. SAC.AD002.173 https://www.disba.cnr.it/en/ ITINERIS - Italian Integrated Environmental Research Infrastructures System https://doi.org/10.13039/501100021856 Ministero dell'Università e della Ricerca PNRR Project IR0000032 https://itineris.cnr.it/ |
The personnel involved in the project:
Collection Data
| Collection Name | Mediterranean Germplasm Genebank (MGG) |
|---|---|
| Collection Identifier | https://www.gbif.org/grscicoll/collection/15ae67ae-82f3-449a-9e78-c336989b8f90 |
| Specimen preservation methods | Deep frozen, Dried |
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Additional Metadata
A full list of the projects involving the seed bank is reported on the IBBR project page (http://ibbr.cnr.it/ibbr/projects).
| Acknowledgements | PNRR Project IR0000032—ITINERIS, Italian Integrated Environmental Research Infrastructures System—CUP B53C22002150006 (D.D. n. 130/2022) Funded by the EU—Next Generation EU—Mission 4 “Education and Research”—Component 2: “From research to business”—Investment 3.1: “Fund for the realization of an integrated system of research and innovation infrastructures” CNR-DiSBA Project No. SAC.AD002.173 BioMemory - Network of scientific collections for bio-monitoring, biodiversity conservation, agri-food and environmental sustainability, and well-being. |
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| Purpose | The Mediterranean Germplasm Database (MGD) is the digital twin of the agri-food plant seed collection (Mediterranean Germplasm Genebank - MGG) maintained at the Institute of Biosciences and BioResources (IBBR) of the Italian National Research Council (CNR) in Bari, Italy. Overall, the collection preserves more than 59,000 accessions of 870 species from 203 genera and 39 families (mainly Poaceae, Fabaceae, Solanaceae, Brassicaceae, Asteraceae, etc.). Over 13,000 samples have been collected over time and georeferenced by IBBR exploration teams, while others have been acquired from other Institutions through exchange activities. The main objective of MGG is to preserve the genetic resources of herbaceous plants of interest for Mediterranean agriculture. Particular attention is dedicated to specific segments of plant genetic resources, such as local varieties (including "typical products") or endangered agroecotypes, wild relatives of crops, and plants potentially useful for extracting bioactive or biotechnological compounds. The main commitments of MGG since 1970 are (i) the collection, conservation, and distribution of PGR; (ii) the characterization and evaluation of PGRs and the analysis of their genetic structure; (ii) the selection and pre-breeding of PGR, and the recognition of useful genes. The seed bank is endowed with refrigerated rooms at 4 °C, 0 °C, and -20 °C, where more than 14,700 kg of seeds are currently stored. |
| Maintenance Description | The dataset is updated when new accessions are collected and/or new information on accessions is recorded in the master database. |
| Alternative Identifiers | f42db412-1aa0-4563-bcf1-308b61cd1971 |
| https://doi.org/10.15468/bxc8pe | |
| https://doi.org/10.17616/R31NJNLU | |
| https://ipt.ibbr.cnr.it/ipt/resource?r=ita436-mgg-hordeum |